Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 AC022447.6-201ENST00000515522 438 ntBASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 AC242376.1-201ENST00000559033 726 ntBASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 PHBP15-201ENST00000574228 665 ntBASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 TSPY25P-201ENST00000429463 745 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AP000358.1-201ENST00000456260 156 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 MIR4706-201ENST00000582134 82 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 Z97180.1-201ENST00000445173 988 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC006335.1-201ENST00000445200 547 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 DUTP3-201ENST00000450025 415 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 FTH1P22-201ENST00000456305 520 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC003686.1-201ENST00000550956 1034 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC124068.2-201ENST00000569473 1109 ntBASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK5RAP2Q96SN8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 KRT18P9-201ENST00000604826 1300 ntBASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 TMCO5B-205ENST00000530020 894 ntBASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP2Q96SN8 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms