Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
APH1AQ96BI3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APH1AQ96BI3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 AP002414.2-201ENST00000591780 3365 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 CNN2P8-201ENST00000421872 913 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 KRT223P-202ENST00000449164 1292 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 AL590640.2-201ENST00000457038 527 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 AC026434.2-201ENST00000506094 1078 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ECM1P1-201ENST00000604092 1279 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 MIR6775-201ENST00000617557 69 ntBASIC13.37□□□□□ -0.27
APH1AQ96BI3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APH1AQ96BI3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APH1AQ96BI3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AGAP7P-201ENST00000582299 2062 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 AGAP14-201ENST00000624701 2060 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 LINC02228-204ENST00000642115 2962 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 FO681548.1-201ENST00000455617 1132 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC078819.1-201ENST00000547454 765 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC012085.1-201ENST00000548270 765 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 SNX29P1-201ENST00000548357 1007 ntBASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APH1AQ96BI3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.36□□□□□ -0.27
APH1AQ96BI3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms