Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AC243960.2-201ENST00000600996 747 ntBASIC14.29□□□□□ -0.12
TM9SF4Q92544 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 AC091271.1-201ENST00000611877 1162 ntBASIC14.29□□□□□ -0.12
TM9SF4Q92544 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 GRK6P1-201ENST00000400595 1711 ntBASIC14.29□□□□□ -0.12
TM9SF4Q92544 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TM9SF4Q92544 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TM9SF4Q92544 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 BCYRN1-201ENST00000418539 200 ntBASIC14.28□□□□□ -0.12
TM9SF4Q92544 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TM9SF4Q92544 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.28□□□□□ -0.12
TM9SF4Q92544 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms