Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RTN4IP1Q8WWV3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 AC092135.3-201ENST00000624151 1846 ntBASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 AC241585.1-201ENST00000433527 519 ntBASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 SLED1-202ENST00000512051 380 ntBASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 AC106028.4-201ENST00000614509 607 ntBASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTN4IP1Q8WWV3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC152010.1-201ENST00000415779 2006 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SDHAP3-202ENST00000515467 728 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC138969.3-201ENST00000546612 1459 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC138932.2-201ENST00000548268 1459 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC126755.4-201ENST00000549796 1459 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms