Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 OR10B1P-201ENST00000601666 907 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 RPL17P11-201ENST00000417593 544 ntBASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 POM121L10P-201ENST00000436994 1285 ntBASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 IMP3P2-201ENST00000489760 475 ntBASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 AC138696.2-201ENST00000607376 223 ntBASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 LINC01101-201ENST00000622953 1884 ntBASIC17.71■□□□□ 0.43
NKX2-3Q8TAU0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NKX2-3Q8TAU0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.71■□□□□ 0.42
NKX2-3Q8TAU0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 AC126915.1-201ENST00000522847 1038 ntBASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-3Q8TAU0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 TPM3P8-201ENST00000330554 643 ntBASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-3Q8TAU0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 311.6 ms