Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 DUTP3-201ENST00000450025 415 ntBASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 AC007881.3-201ENST00000608897 607 ntBASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 AC087392.5-201ENST00000612517 489 ntBASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.42■□□□□ 0.22
PCSK9Q8NBP7 FER1L4-210ENST00000615531 5998 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 LINC02199-201ENST00000506655 2702 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 NFIC-211ENST00000641145 8399 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 CTBP2P4-201ENST00000513884 920 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 SIGLEC18P-201ENST00000602271 909 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 AC009084.3-201ENST00000623356 437 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 AL513523.2-202ENST00000427283 2040 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 AHCYP4-201ENST00000419201 1315 ntBASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.41■□□□□ 0.22
PCSK9Q8NBP7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 AC025271.4-201ENST00000621477 1726 ntBASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 AC092850.2-201ENST00000623821 2697 ntBASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 AL627422.1-201ENST00000434104 580 ntBASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 RPSAP15-201ENST00000448168 861 ntBASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 AC092299.1-201ENST00000632679 757 ntBASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 AP000845.1-201ENST00000581677 2131 ntBASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCSK9Q8NBP7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms