Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 BCAS2P2-201ENST00000425064 674 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 CSNK1G2P1-201ENST00000442675 955 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 LINC01101-201ENST00000622953 1884 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 TLE1P1-201ENST00000422965 589 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 AC114947.1-202ENST00000514136 344 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 FOXN3-AS2-201ENST00000554071 1262 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 GOLGA2P7-209ENST00000560408 745 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 AC055811.3-201ENST00000584952 686 ntBASIC10.2□□□□□ -0.78
CSMD3Q7Z407 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CSMD3Q7Z407 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PYY2-201ENST00000315776 282 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 SERBP1P2-201ENST00000436888 1164 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AREG-202ENST00000502307 956 ntTSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 RN7SL665P-201ENST00000578793 300 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 GEMIN8P4-201ENST00000380526 729 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 RNA5SP417-201ENST00000516459 108 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AC092299.1-201ENST00000632679 757 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AHCYP4-201ENST00000419201 1315 ntBASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC10.19□□□□□ -0.78
CSMD3Q7Z407 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms