Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AL138709.1-201ENST00000614840 1693 ntBASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 RAB43P1-201ENST00000561790 589 ntBASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LYSMD3Q7Z3D4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 CICP14-201ENST00000629111 2732 ntBASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AC112492.5-201ENST00000421897 457 ntBASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 KRT43P-201ENST00000434019 910 ntBASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 CROCCP4-201ENST00000457096 498 ntBASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 CICP23-201ENST00000605013 2741 ntBASIC15.16■□□□□ 0.02
LYSMD3Q7Z3D4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms