Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AC098850.1-201ENST00000419919 790 ntBASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 U91328.1-201ENST00000437528 223 ntBASIC13.93□□□□□ -0.18
ZNF550Q7Z398 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 ELK1P1-201ENST00000485699 580 ntBASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AC011495.1-201ENST00000498085 584 ntBASIC13.93□□□□□ -0.18
ZNF550Q7Z398 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 CTBP2P3-201ENST00000585629 1255 ntBASIC13.93□□□□□ -0.18
ZNF550Q7Z398 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF550Q7Z398 AC007686.3-201ENST00000619017 3487 ntBASIC13.92□□□□□ -0.18
ZNF550Q7Z398 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 HLA-K-203ENST00000430151 1046 ntBASIC13.92□□□□□ -0.18
ZNF550Q7Z398 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 HILS1-202ENST00000545329 423 ntBASIC13.92□□□□□ -0.18
ZNF550Q7Z398 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 PRSS30P-206ENST00000641773 873 ntBASIC13.92□□□□□ -0.18
ZNF550Q7Z398 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF550Q7Z398 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 SOCS2P1-201ENST00000417727 557 ntBASIC13.91□□□□□ -0.18
ZNF550Q7Z398 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF550Q7Z398 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms