Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 SOCS2P1-201ENST00000417727 557 ntBASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HIST2H3AQ71DI3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 MYCLP2-201ENST00000449268 967 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC114812.1-204ENST00000449669 728 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 ENPP7P5-201ENST00000541031 1031 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC004233.3-201ENST00000607794 1269 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AL603764.1-201ENST00000636452 321 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC079781.5-202ENST00000641784 3743 ntBASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST2H3AQ71DI3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms