Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AC104457.1-201ENST00000401024 814 ntBASIC15.23■□□□□ 0.03
RAPH1Q70E73 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AC107890.1-201ENST00000422478 521 ntBASIC15.23■□□□□ 0.03
RAPH1Q70E73 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AC044860.1-202ENST00000559481 777 ntBASIC15.23■□□□□ 0.03
RAPH1Q70E73 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 SAMD11P1-201ENST00000571429 661 ntBASIC15.23■□□□□ 0.03
RAPH1Q70E73 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AC018442.1-201ENST00000421439 2061 ntBASIC15.23■□□□□ 0.03
RAPH1Q70E73 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAPH1Q70E73 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.23■□□□□ 0.03
RAPH1Q70E73 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AL139400.1-201ENST00000366220 510 ntBASIC15.22■□□□□ 0.03
RAPH1Q70E73 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC004461.2-201ENST00000629517 803 ntBASIC15.22■□□□□ 0.03
RAPH1Q70E73 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC079781.4-201ENST00000641908 219 ntBASIC15.22■□□□□ 0.03
RAPH1Q70E73 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 LILRP1-201ENST00000444199 1370 ntBASIC15.22■□□□□ 0.03
RAPH1Q70E73 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.22■□□□□ 0.03
RAPH1Q70E73 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAPH1Q70E73 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAPH1Q70E73 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms