Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 AC003101.2-201ENST00000612557 442 ntBASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 AC007967.4-201ENST00000614700 386 ntBASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 DGCR9-201ENST00000609630 2415 ntBASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.05■□□□□ 0.16
CCNI2Q6ZMN8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AL512384.1-201ENST00000406683 331 ntBASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 RARRES2P9-201ENST00000565168 469 ntBASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC104794.3-201ENST00000566840 1248 ntBASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC106886.1-201ENST00000568660 600 ntBASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC009407.1-201ENST00000568958 598 ntBASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CCNI2Q6ZMN8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 AC105206.1-202ENST00000314927 2368 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 MIR658-201ENST00000385210 100 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 DGCR5-201ENST00000399539 862 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 AP006294.1-201ENST00000415407 339 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 AL139010.1-201ENST00000454878 894 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 RN7SL752P-201ENST00000463779 287 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 AC008738.7-201ENST00000609744 511 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms