Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 RPL5P21-201ENST00000404620 815 ntBASIC15.85■□□□□ 0.13
RNF43Q68DV7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 FO681548.1-201ENST00000455617 1132 ntBASIC15.85■□□□□ 0.13
RNF43Q68DV7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 MIR3615-201ENST00000581999 87 ntBASIC15.85■□□□□ 0.13
RNF43Q68DV7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AL139099.5-201ENST00000635274 300 ntBASIC15.85■□□□□ 0.13
RNF43Q68DV7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 AC009090.5-201ENST00000624886 2285 ntBASIC15.84■□□□□ 0.13
RNF43Q68DV7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 AP000812.2-201ENST00000538934 718 ntBASIC15.84■□□□□ 0.13
RNF43Q68DV7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 AP005019.2-201ENST00000615104 511 ntBASIC15.84■□□□□ 0.13
RNF43Q68DV7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF43Q68DV7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF43Q68DV7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.83■□□□□ 0.13
RNF43Q68DV7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF43Q68DV7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 AC140479.7-201ENST00000636301 2332 ntBASIC15.83■□□□□ 0.12
RNF43Q68DV7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.83■□□□□ 0.12
RNF43Q68DV7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.83■□□□□ 0.12
RNF43Q68DV7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF43Q68DV7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF43Q68DV7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms