Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AL512384.1-201ENST00000406683 331 ntBASIC13.17□□□□□ -0.3
FAM27BQ5VT28 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 INE1-201ENST00000456273 945 ntBASIC13.17□□□□□ -0.3
FAM27BQ5VT28 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AP005018.1-201ENST00000525475 301 ntBASIC13.17□□□□□ -0.3
FAM27BQ5VT28 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 SLC25A47P1-201ENST00000531577 414 ntBASIC13.17□□□□□ -0.3
FAM27BQ5VT28 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AC004466.1-201ENST00000599515 1080 ntBASIC13.17□□□□□ -0.3
FAM27BQ5VT28 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 ENPP7P14-201ENST00000621765 1040 ntBASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM27BQ5VT28 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 MESTP3-201ENST00000503460 968 ntBASIC13.16□□□□□ -0.3
FAM27BQ5VT28 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 INTS4P1-203ENST00000641008 3683 ntBASIC13.16□□□□□ -0.3
FAM27BQ5VT28 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
FAM27BQ5VT28 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms