Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AL512306.1-201ENST00000432698 848 ntBASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AC004837.1-201ENST00000446267 564 ntBASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 AC124068.2-201ENST00000569473 1109 ntBASIC18.57■□□□□ 0.56
RC3H1Q5TC82 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 LINC00431-202ENST00000636375 159 ntBASIC18.57■□□□□ 0.56
RC3H1Q5TC82 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.57■□□□□ 0.56
RC3H1Q5TC82 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 AL139008.1-201ENST00000437894 228 ntBASIC18.56■□□□□ 0.56
RC3H1Q5TC82 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 LINC01101-201ENST00000622953 1884 ntBASIC18.56■□□□□ 0.56
RC3H1Q5TC82 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RC3H1Q5TC82 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AC023024.2-201ENST00000623561 1993 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 DPY19L2P5-201ENST00000456300 331 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 LINC00634-202ENST00000505157 222 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AC084752.1-201ENST00000509766 622 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 RNA5SP417-201ENST00000516459 108 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AC138701.2-201ENST00000553634 226 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 AC138466.4-201ENST00000623965 852 ntBASIC18.55■□□□□ 0.56
RC3H1Q5TC82 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RC3H1Q5TC82 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.54■□□□□ 0.56
RC3H1Q5TC82 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RC3H1Q5TC82 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RC3H1Q5TC82 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
RC3H1Q5TC82 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.54■□□□□ 0.56
RC3H1Q5TC82 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RC3H1Q5TC82 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms