Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC007969.1-201ENST00000433675 447 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AL590640.2-201ENST00000457038 527 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 FTH1P14-201ENST00000482930 551 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 MESTP3-201ENST00000503460 968 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 ECM1P1-201ENST00000604092 1279 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AL022328.1-201ENST00000610050 478 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 AC244669.2-201ENST00000612320 853 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SALL4P5-201ENST00000419001 1760 ntBASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN20Q4JDL3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 KRT17P7-201ENST00000451704 1104 ntBASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 CR383656.12-201ENST00000549567 513 ntBASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 AC011840.2-201ENST00000563063 1520 ntBASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 AC138466.3-201ENST00000619983 221 ntBASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 INE2-201ENST00000630399 1874 ntBASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN20Q4JDL3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 AL354702.1-201ENST00000442006 1960 ntBASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 TLE1P1-201ENST00000422965 589 ntBASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 FAM197Y7-201ENST00000432892 766 ntBASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN20Q4JDL3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms