Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.48■□□□□ 0.39
SSRP1Q08945 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.47■□□□□ 0.39
SSRP1Q08945 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SSRP1Q08945 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 AL035633.1-201ENST00000406139 838 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.47■□□□□ 0.39
SSRP1Q08945 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 AL355864.2-201ENST00000447420 863 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 COX20P2-201ENST00000452636 358 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 AC106760.1-201ENST00000508690 800 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 SLC25A47P1-201ENST00000531577 414 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.47■□□□□ 0.39
SSRP1Q08945 AC015936.2-201ENST00000593177 259 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.47■□□□□ 0.39
SSRP1Q08945 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.47■□□□□ 0.39
SSRP1Q08945 INTS4P1-203ENST00000641008 3683 ntBASIC17.47■□□□□ 0.39
SSRP1Q08945 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.47■□□□□ 0.39
SSRP1Q08945 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSRP1Q08945 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SSRP1Q08945 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSRP1Q08945 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.46■□□□□ 0.39
SSRP1Q08945 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.46■□□□□ 0.39
SSRP1Q08945 NME2P1-201ENST00000426182 414 ntBASIC17.46■□□□□ 0.39
SSRP1Q08945 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 TTTY23B-201ENST00000442790 549 ntBASIC17.46■□□□□ 0.39
SSRP1Q08945 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.46■□□□□ 0.39
SSRP1Q08945 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.46■□□□□ 0.39
SSRP1Q08945 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 AC105233.6-201ENST00000642093 218 ntBASIC17.46■□□□□ 0.39
SSRP1Q08945 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSRP1Q08945 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SSRP1Q08945 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.46■□□□□ 0.39
SSRP1Q08945 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SSRP1Q08945 AC140479.7-201ENST00000636301 2332 ntBASIC17.46■□□□□ 0.38
SSRP1Q08945 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSRP1Q08945 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.45■□□□□ 0.38
SSRP1Q08945 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SSRP1Q08945 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.45■□□□□ 0.38
SSRP1Q08945 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSRP1Q08945 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.45■□□□□ 0.38
SSRP1Q08945 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms