Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.37■□□□□ 0.53
DDR1Q08345 MARK2P16-201ENST00000605714 1723 ntBASIC18.37■□□□□ 0.53
DDR1Q08345 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
DDR1Q08345 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDR1Q08345 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DDR1Q08345 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.36■□□□□ 0.53
DDR1Q08345 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.36■□□□□ 0.53
DDR1Q08345 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.36■□□□□ 0.53
DDR1Q08345 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.36■□□□□ 0.53
DDR1Q08345 AHCYP4-201ENST00000419201 1315 ntBASIC18.36■□□□□ 0.53
DDR1Q08345 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.36■□□□□ 0.53
DDR1Q08345 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.36■□□□□ 0.53
DDR1Q08345 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 AC092638.2-201ENST00000441105 947 ntBASIC18.36■□□□□ 0.53
DDR1Q08345 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DDR1Q08345 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.36■□□□□ 0.53
DDR1Q08345 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.36■□□□□ 0.53
DDR1Q08345 AC244250.3-201ENST00000620749 366 ntBASIC18.36■□□□□ 0.53
DDR1Q08345 AC138466.5-201ENST00000624002 808 ntBASIC18.36■□□□□ 0.53
DDR1Q08345 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DDR1Q08345 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
DDR1Q08345 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDR1Q08345 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.35■□□□□ 0.53
DDR1Q08345 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.35■□□□□ 0.53
DDR1Q08345 AP005117.1-202ENST00000581724 1908 ntBASIC18.35■□□□□ 0.53
DDR1Q08345 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
DDR1Q08345 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.35■□□□□ 0.53
DDR1Q08345 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.35■□□□□ 0.53
DDR1Q08345 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.35■□□□□ 0.53
DDR1Q08345 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
DDR1Q08345 AL513523.2-202ENST00000427283 2040 ntBASIC18.35■□□□□ 0.53
DDR1Q08345 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDR1Q08345 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
DDR1Q08345 LINC01815-202ENST00000641468 1409 ntBASIC18.34■□□□□ 0.53
DDR1Q08345 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.34■□□□□ 0.53
DDR1Q08345 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
DDR1Q08345 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.34■□□□□ 0.53
DDR1Q08345 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.34■□□□□ 0.53
DDR1Q08345 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms