Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL16A1Q07092 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
COL16A1Q07092 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL16A1Q07092 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 SIRPB3P-201ENST00000340424 1216 ntBASIC19.5■□□□□ 0.71
COL16A1Q07092 CASP2-203ENST00000392925 616 ntTSL 3 BASIC19.5■□□□□ 0.71
COL16A1Q07092 EEF1GP8-201ENST00000506566 1154 ntBASIC19.5■□□□□ 0.71
COL16A1Q07092 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.5■□□□□ 0.71
COL16A1Q07092 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.5■□□□□ 0.71
COL16A1Q07092 AC010531.8-201ENST00000623341 685 ntBASIC19.5■□□□□ 0.71
COL16A1Q07092 SSR4P1-203ENST00000599569 2260 ntBASIC19.5■□□□□ 0.71
COL16A1Q07092 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.5■□□□□ 0.71
COL16A1Q07092 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.5■□□□□ 0.71
COL16A1Q07092 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19.5■□□□□ 0.71
COL16A1Q07092 AC105250.1-201ENST00000509378 2057 ntBASIC19.5■□□□□ 0.71
COL16A1Q07092 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL16A1Q07092 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
COL16A1Q07092 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
COL16A1Q07092 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 KHSRPP1-201ENST00000427983 1768 ntBASIC19.49■□□□□ 0.71
COL16A1Q07092 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL16A1Q07092 AL008638.4-201ENST00000624792 1315 ntBASIC19.49■□□□□ 0.71
COL16A1Q07092 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL16A1Q07092 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC19.49■□□□□ 0.71
COL16A1Q07092 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
COL16A1Q07092 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC19.49■□□□□ 0.71
COL16A1Q07092 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 AP000244.1-201ENST00000424582 201 ntBASIC19.49■□□□□ 0.71
COL16A1Q07092 RN7SL578P-201ENST00000477781 283 ntBASIC19.49■□□□□ 0.71
COL16A1Q07092 RN7SL375P-201ENST00000492442 298 ntBASIC19.49■□□□□ 0.71
COL16A1Q07092 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC19.49■□□□□ 0.71
COL16A1Q07092 INO80E-209ENST00000567254 625 ntTSL 2 BASIC19.49■□□□□ 0.71
COL16A1Q07092 EEF1DP7-201ENST00000580496 513 ntBASIC19.49■□□□□ 0.71
COL16A1Q07092 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC19.49■□□□□ 0.71
COL16A1Q07092 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC19.49■□□□□ 0.71
COL16A1Q07092 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.49■□□□□ 0.71
COL16A1Q07092 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.49■□□□□ 0.71
COL16A1Q07092 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL16A1Q07092 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL16A1Q07092 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL16A1Q07092 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
COL16A1Q07092 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.48■□□□□ 0.71
COL16A1Q07092 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC19.48■□□□□ 0.71
COL16A1Q07092 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 HNRNPA3P6-201ENST00000472163 1006 ntBASIC19.48■□□□□ 0.71
COL16A1Q07092 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 AL359091.4-201ENST00000610052 409 ntBASIC19.48■□□□□ 0.71
COL16A1Q07092 AC005865.2-202ENST00000635814 725 ntBASIC19.48■□□□□ 0.71
COL16A1Q07092 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL16A1Q07092 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL16A1Q07092 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL16A1Q07092 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC19.47■□□□□ 0.71
COL16A1Q07092 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL16A1Q07092 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC19.47■□□□□ 0.71
COL16A1Q07092 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.47■□□□□ 0.71
COL16A1Q07092 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL16A1Q07092 FAM21EP-201ENST00000417804 985 ntBASIC19.47■□□□□ 0.71
COL16A1Q07092 TPT1P6-201ENST00000458298 514 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms