Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.38□□□□□ -0.27
NKX6-1P78426 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 AC009542.2-202ENST00000619004 1067 ntBASIC13.38□□□□□ -0.27
NKX6-1P78426 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.38□□□□□ -0.27
NKX6-1P78426 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 AC134312.5-201ENST00000568031 1313 ntBASIC13.38□□□□□ -0.27
NKX6-1P78426 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX6-1P78426 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 C1QBPP1-201ENST00000400117 770 ntBASIC13.37□□□□□ -0.27
NKX6-1P78426 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.37□□□□□ -0.27
NKX6-1P78426 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NKX6-1P78426 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.37□□□□□ -0.27
NKX6-1P78426 AL118558.3-201ENST00000607414 1079 ntBASIC13.37□□□□□ -0.27
NKX6-1P78426 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 RHOXF1P1-202ENST00000635473 501 ntBASIC13.37□□□□□ -0.27
NKX6-1P78426 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-1P78426 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-1P78426 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.37□□□□□ -0.27
NKX6-1P78426 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.37□□□□□ -0.27
NKX6-1P78426 AC084364.1-201ENST00000551967 1556 ntBASIC13.37□□□□□ -0.27
NKX6-1P78426 PRAL-201ENST00000624952 3286 ntBASIC13.37□□□□□ -0.27
NKX6-1P78426 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.36□□□□□ -0.27
NKX6-1P78426 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.36□□□□□ -0.27
NKX6-1P78426 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 AC073347.1-201ENST00000421633 2643 ntBASIC13.36□□□□□ -0.27
NKX6-1P78426 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.36□□□□□ -0.27
NKX6-1P78426 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NKX6-1P78426 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms