Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 AL691432.1-201ENST00000596308 1422 ntBASIC15.78■□□□□ 0.12
IRX4P78413 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
IRX4P78413 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 RPL7P3-201ENST00000441388 714 ntBASIC15.78■□□□□ 0.12
IRX4P78413 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 AC243562.2-201ENST00000561247 970 ntBASIC15.78■□□□□ 0.12
IRX4P78413 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.78■□□□□ 0.12
IRX4P78413 AL391069.4-201ENST00000609583 481 ntBASIC15.78■□□□□ 0.12
IRX4P78413 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.78■□□□□ 0.12
IRX4P78413 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.78■□□□□ 0.12
IRX4P78413 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
IRX4P78413 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IRX4P78413 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
IRX4P78413 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.77■□□□□ 0.12
IRX4P78413 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.77■□□□□ 0.12
IRX4P78413 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
IRX4P78413 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
IRX4P78413 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
IRX4P78413 AC026748.1-201ENST00000624349 3251 ntBASIC15.77■□□□□ 0.12
IRX4P78413 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
IRX4P78413 Z97205.2-201ENST00000564697 1639 ntBASIC15.77■□□□□ 0.12
IRX4P78413 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.77■□□□□ 0.12
IRX4P78413 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.77■□□□□ 0.12
IRX4P78413 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
IRX4P78413 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.77■□□□□ 0.12
IRX4P78413 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.77■□□□□ 0.12
IRX4P78413 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.77■□□□□ 0.12
IRX4P78413 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.77■□□□□ 0.12
IRX4P78413 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
IRX4P78413 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.77■□□□□ 0.12
IRX4P78413 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IRX4P78413 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.77■□□□□ 0.11
IRX4P78413 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.77■□□□□ 0.11
IRX4P78413 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
IRX4P78413 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.77■□□□□ 0.11
IRX4P78413 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
IRX4P78413 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IRX4P78413 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
IRX4P78413 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms