Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
SKP1P63208 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SKP1P63208 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
SKP1P63208 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.34□□□□□ -0.11
SKP1P63208 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SKP1P63208 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.33□□□□□ -0.11
SKP1P63208 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.33□□□□□ -0.11
SKP1P63208 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SKP1P63208 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SKP1P63208 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SKP1P63208 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SKP1P63208 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SKP1P63208 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.33□□□□□ -0.11
SKP1P63208 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SKP1P63208 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.33□□□□□ -0.11
SKP1P63208 AL138709.1-201ENST00000614840 1693 ntBASIC14.33□□□□□ -0.11
SKP1P63208 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SKP1P63208 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.33□□□□□ -0.12
SKP1P63208 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SKP1P63208 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SKP1P63208 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SKP1P63208 ARSEP1-201ENST00000420443 635 ntBASIC14.33□□□□□ -0.12
SKP1P63208 TLE1P1-201ENST00000422965 589 ntBASIC14.33□□□□□ -0.12
SKP1P63208 EIF3FP3-201ENST00000434851 1086 ntBASIC14.33□□□□□ -0.12
SKP1P63208 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 U91328.1-201ENST00000437528 223 ntBASIC14.33□□□□□ -0.12
SKP1P63208 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SKP1P63208 FTH1P14-201ENST00000482930 551 ntBASIC14.33□□□□□ -0.12
SKP1P63208 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.33□□□□□ -0.12
SKP1P63208 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.33□□□□□ -0.12
SKP1P63208 MIR6805-201ENST00000615055 62 ntBASIC14.33□□□□□ -0.12
SKP1P63208 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.33□□□□□ -0.12
SKP1P63208 RHOXF1P1-202ENST00000635473 501 ntBASIC14.33□□□□□ -0.12
SKP1P63208 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SKP1P63208 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.33□□□□□ -0.12
SKP1P63208 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.33□□□□□ -0.12
SKP1P63208 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.33□□□□□ -0.12
SKP1P63208 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 AC006058.4-201ENST00000624016 1670 ntBASIC14.33□□□□□ -0.12
SKP1P63208 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SKP1P63208 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SKP1P63208 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 OR8S1-201ENST00000310194 1080 ntBASIC14.32□□□□□ -0.12
SKP1P63208 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 AC104989.1-201ENST00000519711 778 ntBASIC14.32□□□□□ -0.12
SKP1P63208 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 KRT90P-201ENST00000549264 1064 ntBASIC14.32□□□□□ -0.12
SKP1P63208 AP005482.1-201ENST00000563722 1273 ntBASIC14.32□□□□□ -0.12
SKP1P63208 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.32□□□□□ -0.12
SKP1P63208 AC138951.2-201ENST00000623455 1161 ntBASIC14.32□□□□□ -0.12
SKP1P63208 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.32□□□□□ -0.12
SKP1P63208 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms