Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.84□□□□□ -0.19
CDC42P60953 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CDC42P60953 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDC42P60953 KRT8P22-201ENST00000562317 1415 ntBASIC13.84□□□□□ -0.19
CDC42P60953 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDC42P60953 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.84□□□□□ -0.19
CDC42P60953 AC074338.1-201ENST00000416825 156 ntBASIC13.84□□□□□ -0.19
CDC42P60953 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.84□□□□□ -0.19
CDC42P60953 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.84□□□□□ -0.19
CDC42P60953 AC069335.1-201ENST00000489972 472 ntBASIC13.84□□□□□ -0.19
CDC42P60953 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.84□□□□□ -0.19
CDC42P60953 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.84□□□□□ -0.19
CDC42P60953 AC018529.1-201ENST00000613063 361 ntBASIC13.84□□□□□ -0.19
CDC42P60953 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDC42P60953 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.84□□□□□ -0.19
CDC42P60953 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 AC089987.1-201ENST00000551654 2209 ntBASIC13.84□□□□□ -0.19
CDC42P60953 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 AL731571.1-201ENST00000617058 5428 ntBASIC13.84□□□□□ -0.19
CDC42P60953 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDC42P60953 ZNF259P1-201ENST00000407656 1365 ntBASIC13.83□□□□□ -0.19
CDC42P60953 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CDC42P60953 AL354702.1-201ENST00000442006 1960 ntBASIC13.83□□□□□ -0.19
CDC42P60953 CICP17-201ENST00000418553 2377 ntBASIC13.83□□□□□ -0.19
CDC42P60953 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDC42P60953 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
CDC42P60953 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.83□□□□□ -0.19
CDC42P60953 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDC42P60953 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CDC42P60953 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDC42P60953 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 KRT18P43-201ENST00000469825 1281 ntBASIC13.83□□□□□ -0.2
CDC42P60953 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 SAMD11P1-201ENST00000571429 661 ntBASIC13.83□□□□□ -0.2
CDC42P60953 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.83□□□□□ -0.2
CDC42P60953 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.83□□□□□ -0.2
CDC42P60953 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.83□□□□□ -0.2
CDC42P60953 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDC42P60953 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms