Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN20P56880 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 KRT8P44-201ENST00000441609 1350 ntBASIC13.87□□□□□ -0.19
CLDN20P56880 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN20P56880 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN20P56880 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN20P56880 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CLDN20P56880 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 RPL5P21-201ENST00000404620 815 ntBASIC13.87□□□□□ -0.19
CLDN20P56880 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN20P56880 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.87□□□□□ -0.19
CLDN20P56880 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN20P56880 TDH-203ENST00000531764 1110 ntBASIC13.87□□□□□ -0.19
CLDN20P56880 MIR5189-201ENST00000577370 114 ntBASIC13.87□□□□□ -0.19
CLDN20P56880 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.87□□□□□ -0.19
CLDN20P56880 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN20P56880 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN20P56880 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CLDN20P56880 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CLDN20P56880 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN20P56880 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN20P56880 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CLDN20P56880 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN20P56880 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN20P56880 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN20P56880 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN20P56880 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLDN20P56880 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN20P56880 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN20P56880 ACTG1P3-201ENST00000431775 1114 ntBASIC13.86□□□□□ -0.19
CLDN20P56880 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.86□□□□□ -0.19
CLDN20P56880 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CLDN20P56880 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN20P56880 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN20P56880 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN20P56880 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN20P56880 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN20P56880 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN20P56880 MSTO2P-201ENST00000314835 1709 ntBASIC13.86□□□□□ -0.19
CLDN20P56880 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 AC136759.1-202ENST00000530858 2194 ntBASIC13.86□□□□□ -0.19
CLDN20P56880 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN20P56880 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN20P56880 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms