Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN8P56748 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CLDN8P56748 MRPS18AP1-201ENST00000414458 589 ntBASIC14.34□□□□□ -0.11
CLDN8P56748 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN8P56748 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN8P56748 AL512638.1-201ENST00000457493 794 ntBASIC14.34□□□□□ -0.11
CLDN8P56748 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN8P56748 AL390955.2-201ENST00000603032 514 ntBASIC14.34□□□□□ -0.11
CLDN8P56748 AC023511.2-201ENST00000618803 211 ntBASIC14.34□□□□□ -0.11
CLDN8P56748 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 AC007431.3-201ENST00000623221 587 ntBASIC14.34□□□□□ -0.11
CLDN8P56748 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN8P56748 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN8P56748 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
CLDN8P56748 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN8P56748 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CLDN8P56748 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 SPDYE19P-201ENST00000338590 713 ntBASIC14.33□□□□□ -0.12
CLDN8P56748 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 AC134915.1-201ENST00000426461 574 ntBASIC14.33□□□□□ -0.12
CLDN8P56748 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.33□□□□□ -0.12
CLDN8P56748 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 AC120045.2-201ENST00000567334 178 ntBASIC14.33□□□□□ -0.12
CLDN8P56748 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN8P56748 AL603764.1-201ENST00000636452 321 ntBASIC14.33□□□□□ -0.12
CLDN8P56748 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN8P56748 CICP4-201ENST00000447359 2812 ntBASIC14.33□□□□□ -0.12
CLDN8P56748 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.33□□□□□ -0.12
CLDN8P56748 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLDN8P56748 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN8P56748 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 INTS4P2-202ENST00000614726 2019 ntBASIC14.32□□□□□ -0.12
CLDN8P56748 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN8P56748 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN8P56748 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN8P56748 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms