Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 TNRC18P2-201ENST00000417666 2714 ntBASIC13.02□□□□□ -0.33
HCFC1P51610 AL109954.1-202ENST00000564051 2148 ntBASIC13.02□□□□□ -0.33
HCFC1P51610 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.02□□□□□ -0.33
HCFC1P51610 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
HCFC1P51610 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HCFC1P51610 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HCFC1P51610 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HCFC1P51610 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HCFC1P51610 RN7SL8P-201ENST00000461771 266 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.01□□□□□ -0.33
HCFC1P51610 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
HCFC1P51610 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.01□□□□□ -0.33
HCFC1P51610 AC011491.1-203ENST00000637688 543 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HCFC1P51610 CAP2P1-201ENST00000557743 1390 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 AC020910.5-201ENST00000623668 1865 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
HCFC1P51610 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 RPSAP31-201ENST00000416648 895 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 AL157407.1-201ENST00000435784 904 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.01□□□□□ -0.33
HCFC1P51610 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.01□□□□□ -0.33
HCFC1P51610 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.01□□□□□ -0.33
HCFC1P51610 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.01□□□□□ -0.33
HCFC1P51610 AC020922.3-201ENST00000595064 547 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 AC138696.2-201ENST00000607376 223 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 AL157813.1-201ENST00000612996 587 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 COX6A1P2-201ENST00000620597 330 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 AC051619.9-201ENST00000623237 597 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.01□□□□□ -0.33
HCFC1P51610 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 FAM90A7P-201ENST00000382628 1395 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 FAM90A23P-201ENST00000400136 1395 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HCFC1P51610 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HCFC1P51610 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.01□□□□□ -0.33
HCFC1P51610 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HCFC1P51610 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13□□□□□ -0.33
HCFC1P51610 BID-213ENST00000615414 2236 ntTSL 5 BASIC13□□□□□ -0.33
HCFC1P51610 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13□□□□□ -0.33
HCFC1P51610 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HCFC1P51610 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13□□□□□ -0.33
HCFC1P51610 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms