Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC099336.1-201ENST00000417053 1171 ntBASIC14.53□□□□□ -0.08
RAB28P51157 HLA-V-201ENST00000429037 534 ntBASIC14.53□□□□□ -0.08
RAB28P51157 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB28P51157 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB28P51157 CSF2RBP1-201ENST00000447905 391 ntBASIC14.53□□□□□ -0.08
RAB28P51157 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB28P51157 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB28P51157 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RAB28P51157 MIR4259-201ENST00000584466 101 ntBASIC14.53□□□□□ -0.08
RAB28P51157 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB28P51157 OR10B1P-201ENST00000601666 907 ntBASIC14.53□□□□□ -0.08
RAB28P51157 AC138696.2-201ENST00000607376 223 ntBASIC14.53□□□□□ -0.08
RAB28P51157 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB28P51157 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB28P51157 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB28P51157 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB28P51157 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB28P51157 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RAB28P51157 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB28P51157 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB28P51157 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.52□□□□□ -0.08
RAB28P51157 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB28P51157 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 AC003102.2-201ENST00000589195 1469 ntBASIC14.52□□□□□ -0.08
RAB28P51157 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 AP000593.2-201ENST00000542775 1433 ntBASIC14.52□□□□□ -0.08
RAB28P51157 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB28P51157 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB28P51157 MYO15B-237ENST00000642007 4893 ntBASIC14.52□□□□□ -0.08
RAB28P51157 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB28P51157 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB28P51157 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RAB28P51157 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RAB28P51157 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB28P51157 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB28P51157 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.52□□□□□ -0.09
RAB28P51157 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.52□□□□□ -0.09
RAB28P51157 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.52□□□□□ -0.09
RAB28P51157 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB28P51157 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RAB28P51157 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RAB28P51157 SALL4P5-201ENST00000419001 1760 ntBASIC14.52□□□□□ -0.09
RAB28P51157 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB28P51157 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB28P51157 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RAB28P51157 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB28P51157 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB28P51157 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB28P51157 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB28P51157 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB28P51157 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 LINC01101-201ENST00000622953 1884 ntBASIC14.51□□□□□ -0.09
RAB28P51157 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB28P51157 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms