Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 AL136379.1-201ENST00000623471 2642 ntBASIC14.49□□□□□ -0.09
SLC6A12P48065 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SLC6A12P48065 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SLC6A12P48065 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC6A12P48065 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SLC6A12P48065 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC6A12P48065 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SLC6A12P48065 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.49□□□□□ -0.09
SLC6A12P48065 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SLC6A12P48065 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 AC092135.3-201ENST00000624151 1846 ntBASIC14.48□□□□□ -0.09
SLC6A12P48065 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC6A12P48065 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC6A12P48065 AC005229.1-201ENST00000392885 409 ntBASIC14.48□□□□□ -0.09
SLC6A12P48065 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC6A12P48065 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.48□□□□□ -0.09
SLC6A12P48065 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC6A12P48065 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 AL596325.1-201ENST00000563991 1082 ntBASIC14.48□□□□□ -0.09
SLC6A12P48065 AC025279.2-201ENST00000569730 653 ntBASIC14.48□□□□□ -0.09
SLC6A12P48065 AC015936.2-201ENST00000593177 259 ntBASIC14.48□□□□□ -0.09
SLC6A12P48065 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC6A12P48065 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC6A12P48065 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SLC6A12P48065 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC6A12P48065 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SLC6A12P48065 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 AC092933.1-201ENST00000393644 945 ntBASIC14.47□□□□□ -0.09
SLC6A12P48065 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 AL355864.2-201ENST00000447420 863 ntBASIC14.47□□□□□ -0.09
SLC6A12P48065 INE1-201ENST00000456273 945 ntBASIC14.47□□□□□ -0.09
SLC6A12P48065 GCOM2-201ENST00000509133 1104 ntBASIC14.47□□□□□ -0.09
SLC6A12P48065 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC6A12P48065 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.47□□□□□ -0.09
SLC6A12P48065 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC6A12P48065 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC6A12P48065 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC6A12P48065 SNX18-202ENST00000343017 3140 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms