Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
NR4A2P43354 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.82□□□□□ -0.2
NR4A2P43354 AC244107.1-201ENST00000442033 332 ntBASIC13.82□□□□□ -0.2
NR4A2P43354 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.82□□□□□ -0.2
NR4A2P43354 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A2P43354 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.82□□□□□ -0.2
NR4A2P43354 AC012645.4-201ENST00000610691 1061 ntBASIC13.82□□□□□ -0.2
NR4A2P43354 AL590560.3-201ENST00000623350 461 ntBASIC13.82□□□□□ -0.2
NR4A2P43354 AL035252.4-201ENST00000624174 288 ntBASIC13.82□□□□□ -0.2
NR4A2P43354 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A2P43354 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 ZBED1P1-201ENST00000502364 1930 ntBASIC13.82□□□□□ -0.2
NR4A2P43354 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A2P43354 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A2P43354 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A2P43354 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 AC097359.2-201ENST00000604992 2389 ntBASIC13.81□□□□□ -0.2
NR4A2P43354 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
NR4A2P43354 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.81□□□□□ -0.2
NR4A2P43354 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 AL353705.2-201ENST00000428243 662 ntBASIC13.81□□□□□ -0.2
NR4A2P43354 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A2P43354 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 AC005225.4-201ENST00000557330 545 ntBASIC13.81□□□□□ -0.2
NR4A2P43354 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A2P43354 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A2P43354 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A2P43354 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 AL035456.1-201ENST00000456064 1369 ntBASIC13.81□□□□□ -0.2
NR4A2P43354 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
NR4A2P43354 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A2P43354 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 AC138969.2-201ENST00000532739 9932 ntBASIC13.8□□□□□ -0.2
NR4A2P43354 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NR4A2P43354 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A2P43354 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A2P43354 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.8□□□□□ -0.2
NR4A2P43354 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A2P43354 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.8□□□□□ -0.2
NR4A2P43354 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A2P43354 HLA-V-204ENST00000476601 1289 ntBASIC13.8□□□□□ -0.2
NR4A2P43354 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms