Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
THBS4P35443 MIR5189-201ENST00000577370 114 ntBASIC13.31□□□□□ -0.28
THBS4P35443 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 SBF1P1-201ENST00000444527 5631 ntBASIC13.31□□□□□ -0.28
THBS4P35443 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.31□□□□□ -0.28
THBS4P35443 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 CICP14-201ENST00000629111 2732 ntBASIC13.31□□□□□ -0.28
THBS4P35443 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.31□□□□□ -0.28
THBS4P35443 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THBS4P35443 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
THBS4P35443 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.3□□□□□ -0.28
THBS4P35443 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS4P35443 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
THBS4P35443 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.3□□□□□ -0.28
THBS4P35443 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
THBS4P35443 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 GAPDHP40-201ENST00000505218 1006 ntBASIC13.3□□□□□ -0.28
THBS4P35443 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
THBS4P35443 AP001582.1-201ENST00000525856 295 ntBASIC13.3□□□□□ -0.28
THBS4P35443 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
THBS4P35443 KRT17P8-201ENST00000540749 863 ntBASIC13.3□□□□□ -0.28
THBS4P35443 CLUHP6-201ENST00000580789 941 ntBASIC13.3□□□□□ -0.28
THBS4P35443 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS4P35443 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.3□□□□□ -0.28
THBS4P35443 AL162274.1-201ENST00000617191 1098 ntBASIC13.3□□□□□ -0.28
THBS4P35443 AC005252.2-201ENST00000624630 1141 ntBASIC13.3□□□□□ -0.28
THBS4P35443 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.3□□□□□ -0.28
THBS4P35443 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
THBS4P35443 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
THBS4P35443 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
THBS4P35443 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.3□□□□□ -0.28
THBS4P35443 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
THBS4P35443 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
THBS4P35443 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.29□□□□□ -0.28
THBS4P35443 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms