Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 CYMP-203ENST00000474680 1263 ntBASIC14.41□□□□□ -0.1
GPC1P35052 RPL13AP25-201ENST00000484130 612 ntBASIC14.41□□□□□ -0.1
GPC1P35052 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.41□□□□□ -0.1
GPC1P35052 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
GPC1P35052 RN7SL121P-201ENST00000584223 273 ntBASIC14.41□□□□□ -0.1
GPC1P35052 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
GPC1P35052 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC1P35052 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GPC1P35052 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
GPC1P35052 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC1P35052 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GPC1P35052 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC1P35052 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC1P35052 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GPC1P35052 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC1P35052 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
GPC1P35052 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC1P35052 AC007787.1-201ENST00000588095 1583 ntBASIC14.4□□□□□ -0.1
GPC1P35052 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 AC131212.3-201ENST00000624087 4219 ntBASIC14.4□□□□□ -0.1
GPC1P35052 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC1P35052 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.4□□□□□ -0.1
GPC1P35052 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GPC1P35052 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.4□□□□□ -0.1
GPC1P35052 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.4□□□□□ -0.1
GPC1P35052 RN7SL399P-201ENST00000471648 279 ntBASIC14.4□□□□□ -0.1
GPC1P35052 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 AC104596.2-201ENST00000512793 793 ntBASIC14.4□□□□□ -0.1
GPC1P35052 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.4□□□□□ -0.1
GPC1P35052 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
GPC1P35052 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GPC1P35052 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC1P35052 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GPC1P35052 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
GPC1P35052 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
GPC1P35052 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.39□□□□□ -0.11
GPC1P35052 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GPC1P35052 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.39□□□□□ -0.11
GPC1P35052 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.39□□□□□ -0.11
GPC1P35052 VDAC1P7-201ENST00000462417 847 ntBASIC14.39□□□□□ -0.11
GPC1P35052 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC1P35052 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.39□□□□□ -0.11
GPC1P35052 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.39□□□□□ -0.11
GPC1P35052 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC1P35052 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms