Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HIST1H2APS2-201ENST00000454426 370 ntBASIC20.64■□□□□ 0.9
CPS1P31327 ALG1L3P-201ENST00000503331 765 ntBASIC20.64■□□□□ 0.9
CPS1P31327 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.64■□□□□ 0.9
CPS1P31327 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC20.64■□□□□ 0.9
CPS1P31327 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.64■□□□□ 0.9
CPS1P31327 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC20.64■□□□□ 0.9
CPS1P31327 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.64■□□□□ 0.9
CPS1P31327 AC090510.3-201ENST00000615831 821 ntBASIC20.64■□□□□ 0.9
CPS1P31327 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CPS1P31327 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.64■□□□□ 0.89
CPS1P31327 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.64■□□□□ 0.89
CPS1P31327 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.64■□□□□ 0.89
CPS1P31327 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPS1P31327 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CPS1P31327 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20.63■□□□□ 0.89
CPS1P31327 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC20.63■□□□□ 0.89
CPS1P31327 AC008972.2-201ENST00000606587 494 ntBASIC20.63■□□□□ 0.89
CPS1P31327 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPS1P31327 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 AL136172.1-201ENST00000598590 1394 ntBASIC20.63■□□□□ 0.89
CPS1P31327 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CPS1P31327 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPS1P31327 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.63■□□□□ 0.89
CPS1P31327 RNLS-203ENST00000437752 525 ntTSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.63■□□□□ 0.89
CPS1P31327 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.63■□□□□ 0.89
CPS1P31327 CTBP2P6-201ENST00000526402 1229 ntBASIC20.63■□□□□ 0.89
CPS1P31327 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC20.63■□□□□ 0.89
CPS1P31327 SIGLEC22P-201ENST00000599104 714 ntBASIC20.63■□□□□ 0.89
CPS1P31327 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC20.63■□□□□ 0.89
CPS1P31327 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC20.63■□□□□ 0.89
CPS1P31327 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPS1P31327 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.62■□□□□ 0.89
CPS1P31327 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CPS1P31327 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.62■□□□□ 0.89
CPS1P31327 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.62■□□□□ 0.89
CPS1P31327 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CPS1P31327 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC20.62■□□□□ 0.89
CPS1P31327 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CPS1P31327 RPL18AP8-201ENST00000486071 528 ntBASIC20.62■□□□□ 0.89
CPS1P31327 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.62■□□□□ 0.89
CPS1P31327 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.62■□□□□ 0.89
CPS1P31327 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.62■□□□□ 0.89
CPS1P31327 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.62■□□□□ 0.89
CPS1P31327 RN7SL665P-201ENST00000578793 300 ntBASIC20.62■□□□□ 0.89
CPS1P31327 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 AC020904.3-201ENST00000624199 442 ntBASIC20.62■□□□□ 0.89
CPS1P31327 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.62■□□□□ 0.89
CPS1P31327 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.62■□□□□ 0.89
CPS1P31327 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPS1P31327 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.61■□□□□ 0.89
CPS1P31327 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CPS1P31327 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CPS1P31327 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.61■□□□□ 0.89
CPS1P31327 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms