Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 MIR4254-201ENST00000581063 76 ntBASIC12.24□□□□□ -0.45
APCP25054 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.24□□□□□ -0.45
APCP25054 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.24□□□□□ -0.45
APCP25054 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 AC011270.2-201ENST00000624293 2550 ntBASIC12.24□□□□□ -0.45
APCP25054 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.24□□□□□ -0.45
APCP25054 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.24□□□□□ -0.45
APCP25054 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
APCP25054 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC12.24□□□□□ -0.45
APCP25054 HLA-DMA-202ENST00000395303 1007 ntBASIC12.24□□□□□ -0.45
APCP25054 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.24□□□□□ -0.45
APCP25054 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.24□□□□□ -0.45
APCP25054 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.24□□□□□ -0.45
APCP25054 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC12.24□□□□□ -0.45
APCP25054 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.24□□□□□ -0.45
APCP25054 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.24□□□□□ -0.45
APCP25054 AC090386.2-201ENST00000623010 1039 ntBASIC12.24□□□□□ -0.45
APCP25054 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC12.24□□□□□ -0.45
APCP25054 AC005865.2-202ENST00000635814 725 ntBASIC12.24□□□□□ -0.45
APCP25054 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APCP25054 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
APCP25054 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.23□□□□□ -0.45
APCP25054 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.23□□□□□ -0.45
APCP25054 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.23□□□□□ -0.45
APCP25054 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.23□□□□□ -0.45
APCP25054 RHOQP2-201ENST00000449922 579 ntBASIC12.23□□□□□ -0.45
APCP25054 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.23□□□□□ -0.45
APCP25054 MIR2278-201ENST00000516344 96 ntBASIC12.23□□□□□ -0.45
APCP25054 URB1-AS1-201ENST00000534991 831 ntBASIC12.23□□□□□ -0.45
APCP25054 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.23□□□□□ -0.45
APCP25054 CSTP2-201ENST00000610599 398 ntBASIC12.23□□□□□ -0.45
APCP25054 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.23□□□□□ -0.45
APCP25054 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 FKBP4P8-201ENST00000610931 1369 ntBASIC12.23□□□□□ -0.45
APCP25054 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
APCP25054 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
APCP25054 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
APCP25054 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APCP25054 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
APCP25054 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.23□□□□□ -0.45
APCP25054 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.23□□□□□ -0.45
APCP25054 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
APCP25054 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APCP25054 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC12.23□□□□□ -0.45
APCP25054 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.23□□□□□ -0.45
APCP25054 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.23□□□□□ -0.45
APCP25054 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12.23□□□□□ -0.45
APCP25054 LINC00244-201ENST00000625073 613 ntBASIC12.23□□□□□ -0.45
APCP25054 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
APCP25054 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APCP25054 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APCP25054 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.22□□□□□ -0.45
APCP25054 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.22□□□□□ -0.45
APCP25054 AC006328.1-201ENST00000437571 379 ntBASIC12.22□□□□□ -0.45
APCP25054 AC078814.4-201ENST00000546650 327 ntBASIC12.22□□□□□ -0.45
APCP25054 CES1P2-201ENST00000566467 1242 ntBASIC12.22□□□□□ -0.45
APCP25054 AL590440.2-201ENST00000641973 1595 ntBASIC12.22□□□□□ -0.45
APCP25054 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
APCP25054 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
APCP25054 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APCP25054 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
APCP25054 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms