Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 KRT18P21-201ENST00000515767 1272 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.83□□□□□ -0.36
VAMP1P23763 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.83□□□□□ -0.36
VAMP1P23763 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.83□□□□□ -0.36
VAMP1P23763 AC096734.2-201ENST00000562054 433 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.83□□□□□ -0.36
VAMP1P23763 PRELID1P1-202ENST00000567272 903 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 AL138918.1-201ENST00000568306 659 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.83□□□□□ -0.36
VAMP1P23763 AC073389.1-201ENST00000595595 795 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.83□□□□□ -0.36
VAMP1P23763 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.83□□□□□ -0.36
VAMP1P23763 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.83□□□□□ -0.36
VAMP1P23763 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.83□□□□□ -0.36
VAMP1P23763 AC055811.4-201ENST00000624039 1754 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 DGCR9-201ENST00000609630 2415 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 AC099521.3-201ENST00000624251 2938 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 AC012508.2-201ENST00000567613 1472 ntBASIC12.83□□□□□ -0.36
VAMP1P23763 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
VAMP1P23763 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.83□□□□□ -0.36
VAMP1P23763 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.83□□□□□ -0.36
VAMP1P23763 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.83□□□□□ -0.36
VAMP1P23763 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
VAMP1P23763 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VAMP1P23763 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.82□□□□□ -0.36
VAMP1P23763 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.82□□□□□ -0.36
VAMP1P23763 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
VAMP1P23763 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
VAMP1P23763 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.82□□□□□ -0.36
VAMP1P23763 AC136604.1-201ENST00000418535 575 ntBASIC12.82□□□□□ -0.36
VAMP1P23763 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.82□□□□□ -0.36
VAMP1P23763 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.82□□□□□ -0.36
VAMP1P23763 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 AC005785.2-201ENST00000624655 631 ntBASIC12.82□□□□□ -0.36
VAMP1P23763 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VAMP1P23763 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VAMP1P23763 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VAMP1P23763 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 AC023090.2-201ENST00000625182 2110 ntBASIC12.82□□□□□ -0.36
VAMP1P23763 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
VAMP1P23763 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VAMP1P23763 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VAMP1P23763 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VAMP1P23763 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VAMP1P23763 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.81□□□□□ -0.36
VAMP1P23763 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VAMP1P23763 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.81□□□□□ -0.36
VAMP1P23763 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.81□□□□□ -0.36
VAMP1P23763 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VAMP1P23763 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms