Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 AHCYP2-201ENST00000430630 1300 ntBASIC15.23■□□□□ 0.03
XPAP23025 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 AC073347.1-201ENST00000421633 2643 ntBASIC15.23■□□□□ 0.03
XPAP23025 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
XPAP23025 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 PPT1-215ENST00000641471 2368 ntBASIC15.23■□□□□ 0.03
XPAP23025 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
XPAP23025 MIR1202-201ENST00000408529 83 ntBASIC15.23■□□□□ 0.03
XPAP23025 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.23■□□□□ 0.03
XPAP23025 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 BNIP3P42-201ENST00000454982 569 ntBASIC15.23■□□□□ 0.03
XPAP23025 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 AC119751.2-201ENST00000504529 210 ntBASIC15.23■□□□□ 0.03
XPAP23025 BNIP3P29-201ENST00000598302 571 ntBASIC15.23■□□□□ 0.03
XPAP23025 AC011447.5-201ENST00000616168 564 ntBASIC15.23■□□□□ 0.03
XPAP23025 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
XPAP23025 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
XPAP23025 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
XPAP23025 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XPAP23025 AL137783.1-201ENST00000623494 1896 ntBASIC15.23■□□□□ 0.03
XPAP23025 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
XPAP23025 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 AC099336.1-201ENST00000417053 1171 ntBASIC15.22■□□□□ 0.03
XPAP23025 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.22■□□□□ 0.03
XPAP23025 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.22■□□□□ 0.03
XPAP23025 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.22■□□□□ 0.03
XPAP23025 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.22■□□□□ 0.03
XPAP23025 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.22■□□□□ 0.03
XPAP23025 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.22■□□□□ 0.03
XPAP23025 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.22■□□□□ 0.03
XPAP23025 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.22■□□□□ 0.03
XPAP23025 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.22■□□□□ 0.03
XPAP23025 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
XPAP23025 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
XPAP23025 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
XPAP23025 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms