Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
KCNA3P22001 RN7SL357P-201ENST00000581065 298 ntBASIC18.08■□□□□ 0.48
KCNA3P22001 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
KCNA3P22001 PEBP1P2-201ENST00000603980 558 ntBASIC18.08■□□□□ 0.48
KCNA3P22001 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.08■□□□□ 0.48
KCNA3P22001 MME-218ENST00000625667 363 ntTSL 5 BASIC18.08■□□□□ 0.48
KCNA3P22001 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.08■□□□□ 0.48
KCNA3P22001 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
KCNA3P22001 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNA3P22001 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNA3P22001 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNA3P22001 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
KCNA3P22001 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNA3P22001 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 AC024909.3-201ENST00000611513 2257 ntBASIC18.07■□□□□ 0.48
KCNA3P22001 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KCNA3P22001 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA3P22001 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA3P22001 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNA3P22001 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KCNA3P22001 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KCNA3P22001 RN7SKP109-201ENST00000410592 316 ntBASIC18.07■□□□□ 0.48
KCNA3P22001 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA3P22001 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.07■□□□□ 0.48
KCNA3P22001 AC009145.4-201ENST00000625119 1294 ntBASIC18.07■□□□□ 0.48
KCNA3P22001 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KCNA3P22001 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA3P22001 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KCNA3P22001 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA3P22001 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KCNA3P22001 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA3P22001 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KCNA3P22001 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.06■□□□□ 0.48
KCNA3P22001 ERP29P1-201ENST00000442902 706 ntBASIC18.06■□□□□ 0.48
KCNA3P22001 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 RPL18AP8-201ENST00000486071 528 ntBASIC18.06■□□□□ 0.48
KCNA3P22001 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 HMGB1P24-201ENST00000611897 328 ntBASIC18.06■□□□□ 0.48
KCNA3P22001 AL627230.2-201ENST00000613254 655 ntBASIC18.06■□□□□ 0.48
KCNA3P22001 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.06■□□□□ 0.48
KCNA3P22001 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
KCNA3P22001 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KCNA3P22001 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA3P22001 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms