Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.55□□□□□ -0.56
NTF3P20783 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.55□□□□□ -0.56
NTF3P20783 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.55□□□□□ -0.56
NTF3P20783 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.55□□□□□ -0.56
NTF3P20783 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.55□□□□□ -0.56
NTF3P20783 AP001267.2-201ENST00000532619 2086 ntBASIC11.55□□□□□ -0.56
NTF3P20783 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.55□□□□□ -0.56
NTF3P20783 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.55□□□□□ -0.56
NTF3P20783 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NTF3P20783 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.54□□□□□ -0.56
NTF3P20783 AC004987.2-201ENST00000395959 1148 ntBASIC11.54□□□□□ -0.56
NTF3P20783 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.54□□□□□ -0.56
NTF3P20783 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 AF238378.1-201ENST00000526806 358 ntBASIC11.54□□□□□ -0.56
NTF3P20783 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.54□□□□□ -0.56
NTF3P20783 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.54□□□□□ -0.56
NTF3P20783 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.54□□□□□ -0.56
NTF3P20783 MIR4751-201ENST00000578027 74 ntBASIC11.54□□□□□ -0.56
NTF3P20783 AC024267.1-201ENST00000582320 895 ntBASIC11.54□□□□□ -0.56
NTF3P20783 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 AL450472.2-201ENST00000603663 1156 ntBASIC11.54□□□□□ -0.56
NTF3P20783 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 AP002414.3-201ENST00000589352 1468 ntBASIC11.54□□□□□ -0.56
NTF3P20783 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.54□□□□□ -0.56
NTF3P20783 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 AC083964.2-201ENST00000623988 2396 ntBASIC11.54□□□□□ -0.56
NTF3P20783 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.54□□□□□ -0.56
NTF3P20783 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.54□□□□□ -0.56
NTF3P20783 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NTF3P20783 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NTF3P20783 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NTF3P20783 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.53□□□□□ -0.56
NTF3P20783 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NTF3P20783 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NTF3P20783 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
NTF3P20783 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms