Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.83■□□□□ 0.13
PDGFRAP16234 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
PDGFRAP16234 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFRAP16234 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 MTHFR-210ENST00000641407 2387 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 OR8S1-201ENST00000310194 1080 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PDGFRAP16234 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFRAP16234 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
PDGFRAP16234 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFRAP16234 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PDGFRAP16234 GPR53P-205ENST00000457298 1084 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFRAP16234 USP32P1-208ENST00000506594 1164 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 HILS1-202ENST00000545329 423 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFRAP16234 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFRAP16234 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFRAP16234 AC134312.5-201ENST00000568031 1313 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 INTS4P1-203ENST00000641008 3683 ntBASIC15.83■□□□□ 0.12
PDGFRAP16234 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFRAP16234 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFRAP16234 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.82■□□□□ 0.12
PDGFRAP16234 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PDGFRAP16234 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 AC112492.5-201ENST00000421897 457 ntBASIC15.82■□□□□ 0.12
PDGFRAP16234 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 AC012441.1-201ENST00000446669 685 ntBASIC15.82■□□□□ 0.12
PDGFRAP16234 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.82■□□□□ 0.12
PDGFRAP16234 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.82■□□□□ 0.12
PDGFRAP16234 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.82■□□□□ 0.12
PDGFRAP16234 KRT17P8-201ENST00000540749 863 ntBASIC15.82■□□□□ 0.12
PDGFRAP16234 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 AL162274.1-201ENST00000617191 1098 ntBASIC15.82■□□□□ 0.12
PDGFRAP16234 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.82■□□□□ 0.12
PDGFRAP16234 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDGFRAP16234 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PDGFRAP16234 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.81■□□□□ 0.12
PDGFRAP16234 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.81■□□□□ 0.12
PDGFRAP16234 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDGFRAP16234 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms