Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CDH1P12830 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CDH1P12830 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CDH1P12830 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 AP006294.1-201ENST00000415407 339 ntBASIC14.73□□□□□ -0.05
CDH1P12830 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH1P12830 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH1P12830 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH1P12830 AC027307.3-201ENST00000594262 1100 ntBASIC14.73□□□□□ -0.05
CDH1P12830 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 AC005252.2-201ENST00000624630 1141 ntBASIC14.73□□□□□ -0.05
CDH1P12830 AL033527.5-201ENST00000641382 801 ntBASIC14.73□□□□□ -0.05
CDH1P12830 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH1P12830 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CDH1P12830 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH1P12830 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH1P12830 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 AC041040.2-201ENST00000622926 2899 ntBASIC14.72□□□□□ -0.05
CDH1P12830 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 RNU1-114P-201ENST00000365297 166 ntBASIC14.72□□□□□ -0.05
CDH1P12830 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 ENPP7P5-201ENST00000541031 1031 ntBASIC14.72□□□□□ -0.05
CDH1P12830 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH1P12830 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms