Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.21□□□□□ -0.29
SFTPBP07988 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.21□□□□□ -0.29
SFTPBP07988 AC008761.3-201ENST00000624803 892 ntBASIC13.21□□□□□ -0.29
SFTPBP07988 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.21□□□□□ -0.29
SFTPBP07988 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SFTPBP07988 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SFTPBP07988 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SFTPBP07988 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SFTPBP07988 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.21□□□□□ -0.3
SFTPBP07988 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SFTPBP07988 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.21□□□□□ -0.3
SFTPBP07988 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.21□□□□□ -0.3
SFTPBP07988 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.21□□□□□ -0.3
SFTPBP07988 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SFTPBP07988 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
SFTPBP07988 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SFTPBP07988 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SFTPBP07988 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.2□□□□□ -0.3
SFTPBP07988 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.2□□□□□ -0.3
SFTPBP07988 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
SFTPBP07988 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SFTPBP07988 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.2□□□□□ -0.3
SFTPBP07988 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SFTPBP07988 FAM207CP-201ENST00000443486 507 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AC009477.1-201ENST00000452936 217 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 RN7SL618P-201ENST00000477850 296 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.2□□□□□ -0.3
SFTPBP07988 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 AL512361.1-201ENST00000554200 418 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AC009407.1-201ENST00000568958 598 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AC015910.1-201ENST00000579400 975 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.2□□□□□ -0.3
SFTPBP07988 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.2□□□□□ -0.3
SFTPBP07988 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AC008738.7-201ENST00000609744 511 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SFTPBP07988 AF228730.6-201ENST00000641497 218 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 AC084121.3-201ENST00000641716 218 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SFTPBP07988 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SFTPBP07988 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.2□□□□□ -0.3
SFTPBP07988 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.2□□□□□ -0.3
SFTPBP07988 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SFTPBP07988 WASH3P-207ENST00000560956 1394 ntBASIC13.2□□□□□ -0.3
SFTPBP07988 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.19□□□□□ -0.3
SFTPBP07988 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SFTPBP07988 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.19□□□□□ -0.3
SFTPBP07988 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SFTPBP07988 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms