Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AC012441.2-201ENST00000444843 739 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 SPTLC1P5-201ENST00000450718 252 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AC104073.2-201ENST00000453737 312 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AL645939.5-201ENST00000606834 243 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AC100757.4-201ENST00000626934 759 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AC138627.1-207ENST00000641560 1006 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 TUBBP5-203ENST00000508529 1334 ntBASIC17.63■□□□□ 0.41
HLA-DOAP06340 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOAP06340 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DOAP06340 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RN7SL11P-201ENST00000471305 293 ntBASIC17.62■□□□□ 0.41
HLA-DOAP06340 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 AC106872.11-201ENST00000605838 421 ntBASIC17.62■□□□□ 0.41
HLA-DOAP06340 AC026740.1-201ENST00000607068 791 ntBASIC17.62■□□□□ 0.41
HLA-DOAP06340 AC090164.2-201ENST00000611487 516 ntBASIC17.62■□□□□ 0.41
HLA-DOAP06340 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 AC068587.8-201ENST00000641239 219 ntBASIC17.62■□□□□ 0.41
HLA-DOAP06340 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOAP06340 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOAP06340 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOAP06340 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DOAP06340 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.61■□□□□ 0.41
HLA-DOAP06340 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DOAP06340 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-DOAP06340 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.61■□□□□ 0.41
HLA-DOAP06340 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms