Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A1P02462 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL4A1P02462 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A1P02462 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A1P02462 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A1P02462 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A1P02462 MIR4649-201ENST00000582839 64 ntBASIC17.95■□□□□ 0.46
COL4A1P02462 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A1P02462 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A1P02462 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL4A1P02462 AC009093.10-201ENST00000641956 1442 ntBASIC17.95■□□□□ 0.46
COL4A1P02462 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A1P02462 AHCYP4-201ENST00000419201 1315 ntBASIC17.95■□□□□ 0.46
COL4A1P02462 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A1P02462 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A1P02462 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.94■□□□□ 0.46
COL4A1P02462 AL627422.1-201ENST00000434104 580 ntBASIC17.94■□□□□ 0.46
COL4A1P02462 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.94■□□□□ 0.46
COL4A1P02462 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.94■□□□□ 0.46
COL4A1P02462 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 LINC01783-202ENST00000614408 828 ntBASIC17.94■□□□□ 0.46
COL4A1P02462 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
COL4A1P02462 BX284668.2-205ENST00000619677 828 ntBASIC17.94■□□□□ 0.46
COL4A1P02462 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
COL4A1P02462 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL4A1P02462 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL4A1P02462 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL4A1P02462 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.94■□□□□ 0.46
COL4A1P02462 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
COL4A1P02462 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.93■□□□□ 0.46
COL4A1P02462 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.93■□□□□ 0.46
COL4A1P02462 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.93■□□□□ 0.46
COL4A1P02462 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.93■□□□□ 0.46
COL4A1P02462 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 AP001065.2-201ENST00000617205 644 ntBASIC17.93■□□□□ 0.46
COL4A1P02462 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL4A1P02462 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL4A1P02462 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
COL4A1P02462 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 AC018442.1-201ENST00000421439 2061 ntBASIC17.93■□□□□ 0.46
COL4A1P02462 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 AC018529.2-202ENST00000611482 3087 ntBASIC17.93■□□□□ 0.46
COL4A1P02462 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.93■□□□□ 0.46
COL4A1P02462 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A1P02462 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A1P02462 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.93■□□□□ 0.46
COL4A1P02462 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.93■□□□□ 0.46
COL4A1P02462 AC124068.2-201ENST00000569473 1109 ntBASIC17.93■□□□□ 0.46
COL4A1P02462 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A1P02462 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms