Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 AC138466.3-201ENST00000619983 221 ntBASIC16.18■□□□□ 0.18
HLA-DRAP01903 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 AC112492.5-201ENST00000421897 457 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 AC007969.1-201ENST00000433675 447 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 RNA5SP486-201ENST00000515961 83 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 KRT17P8-201ENST00000540749 863 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 AC106886.1-201ENST00000568660 600 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 AL162274.1-201ENST00000617191 1098 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 SALL4P5-201ENST00000419001 1760 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRAP01903 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 AL138725.1-201ENST00000407347 1314 ntBASIC16.17■□□□□ 0.18
HLA-DRAP01903 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRAP01903 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 PDIA3P1-201ENST00000471856 1510 ntBASIC16.16■□□□□ 0.18
HLA-DRAP01903 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 RN7SKP230-201ENST00000365642 335 ntBASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC079776.1-201ENST00000401540 1152 ntBASIC16.16■□□□□ 0.18
HLA-DRAP01903 CNN2P8-201ENST00000421872 913 ntBASIC16.16■□□□□ 0.18
HLA-DRAP01903 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC078819.1-201ENST00000547454 765 ntBASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC012085.1-201ENST00000548270 765 ntBASIC16.16■□□□□ 0.18
HLA-DRAP01903 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DRAP01903 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DRAP01903 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms