Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CNOT4O95628 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CNOT4O95628 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 KLF2P4-201ENST00000451959 1225 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 CTBP2P5-201ENST00000454986 1264 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.47□□□□□ -0.25
CNOT4O95628 AP000812.2-201ENST00000538934 718 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.47□□□□□ -0.25
CNOT4O95628 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CNOT4O95628 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 RN7SL48P-201ENST00000579283 293 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 MIR6787-201ENST00000616675 61 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 GPR182-203ENST00000622922 591 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.47□□□□□ -0.25
CNOT4O95628 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CNOT4O95628 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 AC006058.4-201ENST00000624016 1670 ntBASIC13.47□□□□□ -0.25
CNOT4O95628 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.47□□□□□ -0.25
CNOT4O95628 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CNOT4O95628 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CNOT4O95628 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CNOT4O95628 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 BRWD1P1-201ENST00000401091 371 ntBASIC13.46□□□□□ -0.25
CNOT4O95628 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 BCRP2-202ENST00000447763 634 ntBASIC13.46□□□□□ -0.25
CNOT4O95628 BCRP6-201ENST00000510112 632 ntBASIC13.46□□□□□ -0.25
CNOT4O95628 BCRP7-201ENST00000511549 544 ntBASIC13.46□□□□□ -0.25
CNOT4O95628 AC022616.1-201ENST00000518688 554 ntBASIC13.46□□□□□ -0.25
CNOT4O95628 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 AC025279.2-201ENST00000569730 653 ntBASIC13.46□□□□□ -0.25
CNOT4O95628 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.46□□□□□ -0.25
CNOT4O95628 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.46□□□□□ -0.25
CNOT4O95628 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CNOT4O95628 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CNOT4O95628 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.46□□□□□ -0.25
CNOT4O95628 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CNOT4O95628 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
CNOT4O95628 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CNOT4O95628 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.46□□□□□ -0.26
CNOT4O95628 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CNOT4O95628 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CNOT4O95628 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms