Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
MBD4O95243 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MBD4O95243 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.89■□□□□ 0.46
MBD4O95243 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MBD4O95243 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
MBD4O95243 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MBD4O95243 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.89■□□□□ 0.46
MBD4O95243 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
MBD4O95243 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MBD4O95243 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 LINC01101-201ENST00000622953 1884 ntBASIC17.89■□□□□ 0.45
MBD4O95243 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MBD4O95243 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.89■□□□□ 0.45
MBD4O95243 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
MBD4O95243 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.89■□□□□ 0.45
MBD4O95243 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.89■□□□□ 0.45
MBD4O95243 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MBD4O95243 HSPB1P2-201ENST00000448722 546 ntBASIC17.89■□□□□ 0.45
MBD4O95243 AL591846.1-201ENST00000451736 433 ntBASIC17.89■□□□□ 0.45
MBD4O95243 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.89■□□□□ 0.45
MBD4O95243 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.89■□□□□ 0.45
MBD4O95243 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.89■□□□□ 0.45
MBD4O95243 AC244157.2-201ENST00000616239 1006 ntBASIC17.89■□□□□ 0.45
MBD4O95243 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.89■□□□□ 0.45
MBD4O95243 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MBD4O95243 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.89■□□□□ 0.45
MBD4O95243 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
MBD4O95243 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
MBD4O95243 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD4O95243 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 AL513477.1-201ENST00000602865 2407 ntBASIC17.88■□□□□ 0.45
MBD4O95243 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.88■□□□□ 0.45
MBD4O95243 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.88■□□□□ 0.45
MBD4O95243 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
MBD4O95243 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.88■□□□□ 0.45
MBD4O95243 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MBD4O95243 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD4O95243 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MBD4O95243 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD4O95243 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms