Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 U91328.1-201ENST00000437528 223 ntBASIC14.14□□□□□ -0.15
TRIM3O75382 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.14□□□□□ -0.15
TRIM3O75382 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 AC015936.2-201ENST00000593177 259 ntBASIC14.14□□□□□ -0.15
TRIM3O75382 AC025181.2-201ENST00000606994 802 ntBASIC14.14□□□□□ -0.15
TRIM3O75382 AC107373.2-201ENST00000607735 490 ntBASIC14.14□□□□□ -0.15
TRIM3O75382 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.14□□□□□ -0.15
TRIM3O75382 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM3O75382 AC084364.1-201ENST00000551967 1556 ntBASIC14.13□□□□□ -0.15
TRIM3O75382 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM3O75382 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM3O75382 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRIM3O75382 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM3O75382 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM3O75382 ACTG1P3-201ENST00000431775 1114 ntBASIC14.13□□□□□ -0.15
TRIM3O75382 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.13□□□□□ -0.15
TRIM3O75382 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.13□□□□□ -0.15
TRIM3O75382 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.13□□□□□ -0.15
TRIM3O75382 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRIM3O75382 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRIM3O75382 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM3O75382 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM3O75382 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM3O75382 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 AC126365.1-201ENST00000578585 1514 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM3O75382 REXO1L2P-201ENST00000425429 2069 ntBASIC14.12□□□□□ -0.15
TRIM3O75382 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM3O75382 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TRIM3O75382 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
TRIM3O75382 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRIM3O75382 TMEM14DP-201ENST00000422205 345 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms