Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1AO00322 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 AL442647.2-201ENST00000429864 857 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1AO00322 AC002472.2-201ENST00000442739 958 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 AC123567.1-201ENST00000548294 1261 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1AO00322 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1AO00322 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.3□□□□□ -0.12
UPK1AO00322 CHCHD2P3-201ENST00000603038 451 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 AC093813.1-201ENST00000605066 256 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 AL157414.3-201ENST00000624276 1954 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UPK1AO00322 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1AO00322 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
UPK1AO00322 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 AL158070.2-201ENST00000623713 1621 ntBASIC14.3□□□□□ -0.12
UPK1AO00322 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
UPK1AO00322 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 AC087499.6-201ENST00000411576 835 ntBASIC14.29□□□□□ -0.12
UPK1AO00322 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.29□□□□□ -0.12
UPK1AO00322 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.29□□□□□ -0.12
UPK1AO00322 AC134915.1-201ENST00000426461 574 ntBASIC14.29□□□□□ -0.12
UPK1AO00322 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 AC092552.1-201ENST00000547243 906 ntBASIC14.29□□□□□ -0.12
UPK1AO00322 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 AC120045.2-201ENST00000567334 178 ntBASIC14.29□□□□□ -0.12
UPK1AO00322 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.29□□□□□ -0.12
UPK1AO00322 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.29□□□□□ -0.12
UPK1AO00322 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UPK1AO00322 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1AO00322 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1AO00322 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.29□□□□□ -0.12
UPK1AO00322 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1AO00322 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UPK1AO00322 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.28□□□□□ -0.12
UPK1AO00322 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1AO00322 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1AO00322 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1AO00322 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms