Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 AC011700.1-201ENST00000610409 2627 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 HMGA1P7-201ENST00000406908 502 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 IGLL3P-201ENST00000412472 434 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 AC093724.1-201ENST00000448659 1027 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 AC079776.4-201ENST00000511039 504 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 AL662844.1-201ENST00000546340 181 ntBASIC13.14□□□□□ -0.31
HMX3A6NHT5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMX3A6NHT5 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMX3A6NHT5 HLA-A-201ENST00000376802 1334 ntBASIC13.13□□□□□ -0.31
HMX3A6NHT5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 IGHV3-22-201ENST00000520721 359 ntBASIC13.13□□□□□ -0.31
HMX3A6NHT5 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms