Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC66A2RUB6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC66A2RUB6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC66A2RUB6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC66A2RUB6 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CCDC66A2RUB6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AC105206.1-202ENST00000314927 2368 ntBASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 ZBED1P1-201ENST00000502364 1930 ntBASIC16.45■□□□□ 0.22
CCDC66A2RUB6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 SPDYE17-201ENST00000412399 783 ntBASIC16.45■□□□□ 0.22
CCDC66A2RUB6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AC105021.1-202ENST00000570572 669 ntBASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 ELL2P1-201ENST00000413990 1906 ntBASIC16.45■□□□□ 0.22
CCDC66A2RUB6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC66A2RUB6 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AC083964.2-201ENST00000623988 2396 ntBASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 BANF1P1-201ENST00000553684 263 ntBASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AC022145.2-201ENST00000598203 171 ntBASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AC018529.1-201ENST00000613063 361 ntBASIC16.44■□□□□ 0.22
CCDC66A2RUB6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AC105339.1-204ENST00000636249 355 ntBASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms