Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HFM1A2PYH4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 AC018629.1-201ENST00000623381 1736 ntBASIC21.89■■□□□ 1.09
HFM1A2PYH4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HFM1A2PYH4 TPT1P11-201ENST00000458482 498 ntBASIC21.89■■□□□ 1.09
HFM1A2PYH4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 RERG-205ENST00000537647 935 ntTSL 2 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.89■■□□□ 1.09
HFM1A2PYH4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 LBH-202ENST00000401506 485 ntTSL 3 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 FNTAP2-201ENST00000430308 634 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 XBP1P1-201ENST00000436573 652 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 MYADML-201ENST00000474610 2147 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 MIR3619-201ENST00000579667 83 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 MEG3_2.1-201ENST00000611456 105 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HFM1A2PYH4 AGGF1P1-201ENST00000509500 2073 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 AC015688.4-201ENST00000580780 1647 ntBASIC21.88■■□□□ 1.09
HFM1A2PYH4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HFM1A2PYH4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 CHMP4BP1-201ENST00000556017 588 ntBASIC21.87■■□□□ 1.09
HFM1A2PYH4 COG4-212ENST00000564653 590 ntTSL 5 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.87■■□□□ 1.09
HFM1A2PYH4 AL136295.7-201ENST00000619226 1200 ntBASIC21.87■■□□□ 1.09
HFM1A2PYH4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HFM1A2PYH4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms